CDS

Accession Number TCMCG077C14331
gbkey CDS
Protein Id KAF5739587.1
Location complement(join(9674925..9675005,9675264..9675365,9675451..9675528,9675639..9675704,9676112..9676205,9678198..9678274,9680026..9680235,9680683..9680800,9681196..9681293,9681427..9681492,9682246..9682408,9682512..9682656,9682729..9682820,9685730..9685836,9686222..9686278,9687112..9687298,9687378..9687505,9687644..9687749,9687837..9687916,9688184..9688281,9688357..9688470,9688552..9688777,9689047..9689331))
Organism Tripterygium wilfordii
locus_tag HS088_TW12G00796

Protein

Length 925aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA542587, BioSample:SAMN11634134
db_source JAAARO010000012.1
Definition pentatricopeptide repeat-containing protein [Tripterygium wilfordii]
Locus_tag HS088_TW12G00796

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K16280        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000209        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009308        [VIEW IN EMBL-EBI]
GO:0009690        [VIEW IN EMBL-EBI]
GO:0009787        [VIEW IN EMBL-EBI]
GO:0009789        [VIEW IN EMBL-EBI]
GO:0009850        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009967        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010647        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023056        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0034754        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042445        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070534        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080148        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901419        [VIEW IN EMBL-EBI]
GO:1901421        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1905957        [VIEW IN EMBL-EBI]
GO:1905959        [VIEW IN EMBL-EBI]
GO:2000070        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTGGCGGAAGTTCAAAGGAAAAGAGTTGGAGGCAGACTTCATCAATTCGTTCAAGCTCATCTTCGCGGGATTATTCACAAGCACCATATGCATCGCAGCAGTTTTACCCGTCATCTCAAGACTATGCATCGCAGCAACCTTATCCATCGCAGCAGTATTATCCGTCATCTCAAGACTATGCGCCCCAGCAATATCCCCCACCTCAAGACTATGGTGCCAATAAAAGGAGGCTCGAGAGGAAGTATTCAAAGATTGCAGATAGTTACAACTCCTTAGAAGAGGTAACTGAGGCTCTTGCATGCGCTGGCCTAGAGTCTTCAAATCTAATTGTTGGAATTGATTTCACAAAGAGCAATGAGTGGACAGGTGCAAAGTCTTTCAATAAGCGAAGCTTGCATCACATTGGAGATTTTTTAAATCCCTATCAGGAAGCAATATCGATCATTGGGAAAACCTTGGCTGCTTTTGATGAGGATAACTTGATCCCCTGTTATGGGTTTGGAGATGCATCAACACATGATCAAGATGTCTTCAGTTTCTATCCAGATGATAGATTTTGTCACGGATTTGAGGAAGTCTTGAGTCGTTACCAGGAAATAGTGCCTAATCTACGACTTGCAGGGCCAACATCCTTTGCTCCTGTCATTGAAATGGCCATGACTATCGTTGAACAGAGTGGTGGTCAGTACCATGTACTATTGATTATTGCAGATGGACAGGTGACCAGGAGTGTAGATACCGAGCGTGGCCAGCTGAGTCCACAAGAGAAAAAGACTGTTGATGCCATTGTACGAGCAAGCAAGCTTCCTCTCTCAATTATATTAGTTGGGGTTGGAGATGGGCCCTGGGACATGATGAAGGAATTTGATGATAATATCCCTGCCCGAGACTTTGATAATTTCCAATTTGTGAATTTTACGGAGATTATGTCTAAGAATATGAGCCAATTGCGGAAGGAGACTGAGTTTGCCCTTGCTGCTTTGATGGAAATTCCTTCACAATACAAGGCAACAATAGAGCACAATATCCTGGGTAGGCGGAAAGGAGATGTTCCTGAGAGGGTTTCCCTCCCTCCACCTGTATATGGCGCAGCATCTTTCAGCAGCTTGAAACCTTCTCATTCTACTAGTTTTGTTAAGTCTAGTGTGCCACCGTATAAAGGAGACAGGCAGCCTGCGAGCTCAGCTCCACCTGCTATGGCTTCAACTTATGATAGCCAGGTTTGCCCTATTTGCCTTACGAACTCCAAGGATATGGCCTTTGGTTGTGGGCATCAGAATCAGATGTTTCTTGTTGTTGCACAAATTAGAGGGACCATAGTCAACATAGTGAGGTTCAAGATTCCAAGCCTGAGGTGGATTAGGATCAAGATTCCAAGCCTGAGAAACTCGGACTCCCTCCGATGCAGATGCTTTGAGAAGGCCGTACCGGTGACTCCTTCAACTTCAACAATGAAGCTCCTTCAATTCATTCATGGACCTCAAAATCGTTACCTCCTGCGAGCGATTGGCCGCCGATACTTCGCTGCTGCTGCCGCCACGGAAGAGTACGCCAAGCGCAACTACGCCAGCGATGTCAATGGTTACTATGCTGCCATTGGTTCTCTAACCAATCTACGCAGGAATTTTCTATTGAGGGATGCCTACGATGATATGGTGTTGGATGGGGTGCAGCCAACGCGAGACATTTTCCATTCTCTGATCGTGGGTACCATGAAAGGTGCTCGCTTGCAGGATGCTTTTTTCTTCCGAGATGAAATGAAGGCGATGGGTTTGGTCCCTGATGTTTTCATGTACAACCTTTTGATCTCAACTTGTGGCAAATGCAAGAATTCTGACCAGGCAATTCGGATCTTGGAAGAAATGAAGATGTGTGAAGTGACACCAAATGGGCAAACTTATGTCTGTCTACTTAATGCTTGTGCAGCCGCTGGTCGATTAGATCGAGTGTATGCAATTGTACGTGATATGACTGCAGCTGGAGCTGGTTTGAACAAGTTCTGCTATGCTGGGCTTATAACTGCTCATGTTAACAAGACACACACAACGGATGATACAGCTTCTAAAATTCTTGAGTTTGTTGAGCGGTCAAAGGGATGGTCATCAGTTGAAGCTTCTAGTGACAGTGCTGAAAATGTGATGATGGGTGTTTATGAAGAAGAATTATACAATACACCAACTGCTGAGTATGCTCATCGGCGTAATGGATTTTTGATTAGGGAATTGACTGTTTATCATGCTGCATTTCATGCTTGTGCCGAACTCAGGAATGTGGAGGCTGTGAAAACTCTTCTCGATATGCTTCAGAAGGATGGAAAATCTCCTGATGTCTTCATTCTTATGCAAACTATGAGATGCTATCTACGATGTGGAGACCTTGATCGTGCTCTTAAAATATTTGATGACTACATGAGCTCGGGCAAGCCTCCTATGATAGAACTTTTTGTGACACTTGCAGAGGGTGCGATGATTGGACATACTCCAAGGGGAATGCAAGTTGCTTGTGAAATATTGGTGAATATGAACTCCAGGAACTTTAACTTGCGTCCAAAAATGGGAAGTGATCTCCTCCTCCTAGCTTCACAGGACAAGACTGGTGGATTTACCACTGCCAATTATATATGGGACCTGATGCAAGGGCAGAGAATGGTACCTATGCTTCCTGCAGTAGAAGCATATTACAATGGTTTAAAAGAACGCGCGATACCTGAAGATGATCCAAGGTTGTTACATGTCTCTCGTACTTATGACAGCTTGCGCTTAAGACGGCCTTAG
Protein:  
MGGGSSKEKSWRQTSSIRSSSSSRDYSQAPYASQQFYPSSQDYASQQPYPSQQYYPSSQDYAPQQYPPPQDYGANKRRLERKYSKIADSYNSLEEVTEALACAGLESSNLIVGIDFTKSNEWTGAKSFNKRSLHHIGDFLNPYQEAISIIGKTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPDDRFCHGFEEVLSRYQEIVPNLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLLIIADGQVTRSVDTERGQLSPQEKKTVDAIVRASKLPLSIILVGVGDGPWDMMKEFDDNIPARDFDNFQFVNFTEIMSKNMSQLRKETEFALAALMEIPSQYKATIEHNILGRRKGDVPERVSLPPPVYGAASFSSLKPSHSTSFVKSSVPPYKGDRQPASSAPPAMASTYDSQVCPICLTNSKDMAFGCGHQNQMFLVVAQIRGTIVNIVRFKIPSLRWIRIKIPSLRNSDSLRCRCFEKAVPVTPSTSTMKLLQFIHGPQNRYLLRAIGRRYFAAAAATEEYAKRNYASDVNGYYAAIGSLTNLRRNFLLRDAYDDMVLDGVQPTRDIFHSLIVGTMKGARLQDAFFFRDEMKAMGLVPDVFMYNLLISTCGKCKNSDQAIRILEEMKMCEVTPNGQTYVCLLNACAAAGRLDRVYAIVRDMTAAGAGLNKFCYAGLITAHVNKTHTTDDTASKILEFVERSKGWSSVEASSDSAENVMMGVYEEELYNTPTAEYAHRRNGFLIRELTVYHAAFHACAELRNVEAVKTLLDMLQKDGKSPDVFILMQTMRCYLRCGDLDRALKIFDDYMSSGKPPMIELFVTLAEGAMIGHTPRGMQVACEILVNMNSRNFNLRPKMGSDLLLLASQDKTGGFTTANYIWDLMQGQRMVPMLPAVEAYYNGLKERAIPEDDPRLLHVSRTYDSLRLRRP